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CCTM COMPILATION
Maria. lizadams April 2, 2019, 7:16pm #2. Hi Maria, It may be something as simple of adding -lmpi to your config_cmaq.csh. config_cmaq.csh: setenv mpi_lib “-lmpi”. If this doesn’t work, please send the following information: If you are using modules on a compute server, please use the module list command to see whatcompiler is loaded:
MPI_ABORT WAS INVOKED ON RANK 3 I run CMAQ 5.2.1 when March 16 2017 at 01:00:00 to March 31 2017 at 18:00:00. But it success until March 16 2017 at 17:00:00. It have maseage that: —>> WARNING in subroutine Read BCs on PE 000 Applying fix to aerosol Boundary Conditions for aerosol modes. Turn on verbose_rdbcon preprocessor flag to learnmore. M3WARN: DTBUF 20:52:30 March 16, 2017(2017075:205230) after IOAPI INSTALLTION UNABLE Hello Team, During the installation process in step three am curious to understand whether we need to create a directory named BIN na d the copy the files under the folder LIB. CMAQ ISAM OZONE SOURCE APPORTIONMENT WEIRD SITUATION Hello everyone, I am running CMAQ ISAM for ozone source apportionment. My study domain is whole US, some sourthern part Canada, and northern part Mexico. My study source region is Connecticut State. The weird thing is there is a high ozone contribution in Califonia area. The following map is three month average Connecticut source contribution result. Would you tell me why this HAVE PROBLEM WHEN RUN MCIP 5.0 WITH WRF 4.1 Dir Catalyst2682, This is my log file, but only the same information. Also, I send my csh file and make file when I compile MCIP (in CMAQ 5.3).Makefile.txt (4.7 KB) Look forward to the help of you and everyone using CMAQ. FOR USING SENSITIVITY BC FILE FOR NESTED RUNS Sergey, How do I need to setup if I have three nested domains (e.g. 36-km, 12-km, and 4-km)? I would like to get sensitivity BC files for second (12-km) and third domain (4-km) because I am studying how emission reductions of NOx and VOC in both coarse domains (36 and 12-km) influence surface ozone in the target domain (4-km). PROBLE OF RUNNING CMAQ5.3 Please see this post on best practices for debugging and posting questions on the forum: PLEASE READ before posting MCIP ISSUE ABOUT FRC_URB2D I checked the variable “FRC_URB2D” and only find it in the geo_em.d0x.nc files rather than in the wrfout file. Thus, it looks like mcip is trying to extract this variable from wrfout files whereas this variable is not in it. 12-KM EMISSIONS DATASET FOR CMAQ Hello, I urgently need of 12-km emissions dataset as an input of CMAQ. Anyone know is there any place to download the from EPA ftp server or CMAS directly, rather than doing SMOKE modeling? If so, please let me know the link. Thank you very much. QUESTIONS ABOUT SENSINPUT FILE Hi, I’m new to CAMQ-HDDM. Although I’ve already run it succesfully, I had some questions. Looking forward to your reply, thanks! EMIS term. I have some problems using “EMIS_1”,and fixed it with replacing EMIS_1 with TOTA. But i don’t know how to use more than 1 emision file, something like “EMIS_2”? AMOUNT term. If i want to cut 20% NOx in the region_1 using positive numberCCTM COMPILATION
Maria. lizadams April 2, 2019, 7:16pm #2. Hi Maria, It may be something as simple of adding -lmpi to your config_cmaq.csh. config_cmaq.csh: setenv mpi_lib “-lmpi”. If this doesn’t work, please send the following information: If you are using modules on a compute server, please use the module list command to see whatcompiler is loaded:
MPI_ABORT WAS INVOKED ON RANK 3 I run CMAQ 5.2.1 when March 16 2017 at 01:00:00 to March 31 2017 at 18:00:00. But it success until March 16 2017 at 17:00:00. It have maseage that: —>> WARNING in subroutine Read BCs on PE 000 Applying fix to aerosol Boundary Conditions for aerosol modes. Turn on verbose_rdbcon preprocessor flag to learnmore. M3WARN: DTBUF 20:52:30 March 16, 2017(2017075:205230) after IOAPI INSTALLTION UNABLE Hello Team, During the installation process in step three am curious to understand whether we need to create a directory named BIN na d the copy the files under the folder LIB. CMAQ ISAM OZONE SOURCE APPORTIONMENT WEIRD SITUATION Hello everyone, I am running CMAQ ISAM for ozone source apportionment. My study domain is whole US, some sourthern part Canada, and northern part Mexico. My study source region is Connecticut State. The weird thing is there is a high ozone contribution in Califonia area. The following map is three month average Connecticut source contribution result. Would you tell me why this HAVE PROBLEM WHEN RUN MCIP 5.0 WITH WRF 4.1 Dir Catalyst2682, This is my log file, but only the same information. Also, I send my csh file and make file when I compile MCIP (in CMAQ 5.3).Makefile.txt (4.7 KB) Look forward to the help of you and everyone using CMAQ. FOR USING SENSITIVITY BC FILE FOR NESTED RUNS Sergey, How do I need to setup if I have three nested domains (e.g. 36-km, 12-km, and 4-km)? I would like to get sensitivity BC files for second (12-km) and third domain (4-km) because I am studying how emission reductions of NOx and VOC in both coarse domains (36 and 12-km) influence surface ozone in the target domain (4-km). CMAQ 5.3.2 RELEASE (OCTOBER 2020) The U.S. EPA Office of Research and Development and the Community Modeling and Analysis System Center are pleased to announce the release of CMAQ version 5.3.2. CMAQ ISAM OZONE SOURCE APPORTIONMENT WEIRD SITUATION Hello everyone, I am running CMAQ ISAM for ozone source apportionment. My study domain is whole US, some sourthern part Canada, and northern part Mexico. My study source region is Connecticut State. The weird thing is there is a high ozone contribution in Califonia area. The following map is three month average Connecticut source contribution result. Would you tell me why thisCMAQ 5.3.2 ISAM RUN
Hi, I recently installed CMAQ 5.3.2 and trying to run test cases. The base case runs successfully but when I try to run ISAM case, it stops with an error, looking at the log files, the end lines are: *** ERRORABORT i
COMBINE RUN ISSUE
Thanks for alerting us to the duplication of the BENZENE definition in SpecDef_saprc07tb_ae6_aq.txt. Commenting out or deleting one of the CITATIONS: HEMISPHERIC MODEL FOR GENERATING BC CONDITIONS Hello What would be the proper citations for using /CCTM_CONC_v53beta2_intel17.0_HEMIS_cb6r3m_ae7_kmtbr_m3dry_2018_quarterly_av.nc to generate boundary conditions SPATIAL ALLOCATOR ISSUE WITH RUNNING LOG FILE WITH ERROR: WARNING: Environment variable: MAX_INPUT_FILE_SHAPES, not set WARNING: Environment variable: OVERLAY_TYPE, not set WARNING: Environment variable: MAX_LINE_SEG, not set WARNING: Environment variable: OVERLAY_TYPE, not set WARNING: Environment variable: MAX_LINE_SEG, not set Spatial Allocator Version3.6, 03/10/2009 EV:
FOR USING SENSITIVITY BC FILE FOR NESTED RUNS Sergey, How do I need to setup if I have three nested domains (e.g. 36-km, 12-km, and 4-km)? I would like to get sensitivity BC files for second (12-km) and third domain (4-km) because I am studying how emission reductions of NOx and VOC in both coarse domains (36 and 12-km) influence surface ozone in the target domain (4-km). CCTM DOESN'T WRITE CGRID FILE I am trying to run CMAQv5.2.1 and was able to successfully run the benchmark case. But now in trying to run my own simulation, the CCTM is not writing all of the necessary output files before it moves on tothe next day
MAXIMUM AQCHEM TOTAL ITERATIONS EXCEEDED Hi Mr. Nolte, I figured out that issue, the problem was in the emissions file, where there were some concentrations extremely high (which were wrong due to a problem relate to SMOKE processor andtemporal profiles).
MCIP ERROR IN CMAQV5.0.2 I am using MCIPv3.4.1. set do = 01 set YY = 2014 set Target_YY = 2014 set Target_MM = 07 set MM_S = 07 set DD_S = 01 set MM_E = 07 set DD_E = 11 set J_SDATE = 182 MCIP ISSUE ABOUT FRC_URB2D I checked the variable “FRC_URB2D” and only find it in the geo_em.d0x.nc files rather than in the wrfout file. Thus, it looks like mcip is trying to extract this variable from wrfout files whereas this variable is not in it. PROBLE OF RUNNING CMAQ5.3 Please see this post on best practices for debugging and posting questions on the forum: PLEASE READ before posting QUESTIONS ABOUT SENSINPUT FILE Hi, I’m new to CAMQ-HDDM. Although I’ve already run it succesfully, I had some questions. Looking forward to your reply, thanks! EMIS term. I have some problems using “EMIS_1”,and fixed it with replacing EMIS_1 with TOTA. But i don’t know how to use more than 1 emision file, something like “EMIS_2”? AMOUNT term. If i want to cut 20% NOx in the region_1 using positive number TURNING OFF CHEMISTRY MECHANISM IN CMAQ Hi everyone. I’m using CMAQv5.3.1 to simulate Ozone concentration. As I’m using the local emission inventory, I have to generate emission files by myself instead of using SMOKE. I’ve successfully generate the emission files and they can be read by CMAQ. However I got very low O3 concentration and I doubted if my emissions are correct. In order to debug the issue, I want to turn off MPI_ABORT WAS INVOKED ON RANK 3 I run CMAQ 5.2.1 when March 16 2017 at 01:00:00 to March 31 2017 at 18:00:00. But it success until March 16 2017 at 17:00:00. It have maseage that: —>> WARNING in subroutine Read BCs on PE 000 Applying fix to aerosol Boundary Conditions for aerosol modes. Turn on verbose_rdbcon preprocessor flag to learnmore. M3WARN: DTBUF 20:52:30 March 16, 2017(2017075:205230) after IOAPI INSTALLTION UNABLE Hello Team, During the installation process in step three am curious to understand whether we need to create a directory named BIN na d the copy the files under the folder LIB.COMBINE RUN ISSUE
Thanks for alerting us to the duplication of the BENZENE definition in SpecDef_saprc07tb_ae6_aq.txt. Commenting out or deleting one of the HAVE PROBLEM WHEN RUN MCIP 5.0 WITH WRF 4.1 Dir Catalyst2682, This is my log file, but only the same information. Also, I send my csh file and make file when I compile MCIP (in CMAQ 5.3).Makefile.txt (4.7 KB) Look forward to the help of you and everyone using CMAQ. FOR USING SENSITIVITY BC FILE FOR NESTED RUNS Sergey, How do I need to setup if I have three nested domains (e.g. 36-km, 12-km, and 4-km)? I would like to get sensitivity BC files for second (12-km) and third domain (4-km) because I am studying how emission reductions of NOx and VOC in both coarse domains (36 and 12-km) influence surface ozone in the target domain (4-km). WARNING IN SUBROUTINE READ BCS Hi all, I have been trying to run CMAQ using four nested domains in Brazil, and the multi-day simulations have been displaying a Warning message on Read BC subroutine: >>—>> WARNING in subroutine Read BCs on PE 000 Applying fix to aerosol Boundary Conditions for aerosol modes. Turn on verbose_rdbcon preprocessor flag to learnmore. Even with the warnings, coarser domains (d01 and MCIP ISSUE ABOUT FRC_URB2D I checked the variable “FRC_URB2D” and only find it in the geo_em.d0x.nc files rather than in the wrfout file. Thus, it looks like mcip is trying to extract this variable from wrfout files whereas this variable is not in it. PROBLE OF RUNNING CMAQ5.3 Please see this post on best practices for debugging and posting questions on the forum: PLEASE READ before posting QUESTIONS ABOUT SENSINPUT FILE Hi, I’m new to CAMQ-HDDM. Although I’ve already run it succesfully, I had some questions. Looking forward to your reply, thanks! EMIS term. I have some problems using “EMIS_1”,and fixed it with replacing EMIS_1 with TOTA. But i don’t know how to use more than 1 emision file, something like “EMIS_2”? AMOUNT term. If i want to cut 20% NOx in the region_1 using positive number TURNING OFF CHEMISTRY MECHANISM IN CMAQ Hi everyone. I’m using CMAQv5.3.1 to simulate Ozone concentration. As I’m using the local emission inventory, I have to generate emission files by myself instead of using SMOKE. I’ve successfully generate the emission files and they can be read by CMAQ. However I got very low O3 concentration and I doubted if my emissions are correct. In order to debug the issue, I want to turn off MPI_ABORT WAS INVOKED ON RANK 3 I run CMAQ 5.2.1 when March 16 2017 at 01:00:00 to March 31 2017 at 18:00:00. But it success until March 16 2017 at 17:00:00. It have maseage that: —>> WARNING in subroutine Read BCs on PE 000 Applying fix to aerosol Boundary Conditions for aerosol modes. Turn on verbose_rdbcon preprocessor flag to learnmore. M3WARN: DTBUF 20:52:30 March 16, 2017(2017075:205230) after IOAPI INSTALLTION UNABLE Hello Team, During the installation process in step three am curious to understand whether we need to create a directory named BIN na d the copy the files under the folder LIB.COMBINE RUN ISSUE
Thanks for alerting us to the duplication of the BENZENE definition in SpecDef_saprc07tb_ae6_aq.txt. Commenting out or deleting one of the HAVE PROBLEM WHEN RUN MCIP 5.0 WITH WRF 4.1 Dir Catalyst2682, This is my log file, but only the same information. Also, I send my csh file and make file when I compile MCIP (in CMAQ 5.3).Makefile.txt (4.7 KB) Look forward to the help of you and everyone using CMAQ. FOR USING SENSITIVITY BC FILE FOR NESTED RUNS Sergey, How do I need to setup if I have three nested domains (e.g. 36-km, 12-km, and 4-km)? I would like to get sensitivity BC files for second (12-km) and third domain (4-km) because I am studying how emission reductions of NOx and VOC in both coarse domains (36 and 12-km) influence surface ozone in the target domain (4-km). WARNING IN SUBROUTINE READ BCS Hi all, I have been trying to run CMAQ using four nested domains in Brazil, and the multi-day simulations have been displaying a Warning message on Read BC subroutine: >>—>> WARNING in subroutine Read BCs on PE 000 Applying fix to aerosol Boundary Conditions for aerosol modes. Turn on verbose_rdbcon preprocessor flag to learnmore. Even with the warnings, coarser domains (d01 and NO DATA STARTING AT... IN M3TPROC I have an emissions file that has 25 time steps (2016001:080000 → 2016002:080000). I’m trying to generate a file with a daily total (24 hours). When I run M3TPROC I get the following errors. CMAQ 5.3.2 RELEASE (OCTOBER 2020) The U.S. EPA Office of Research and Development and the Community Modeling and Analysis System Center are pleased to announce the release of CMAQ version 5.3.2. TURNING OFF CHEMISTRY MECHANISM IN CMAQ Hi everyone. I’m using CMAQv5.3.1 to simulate Ozone concentration. As I’m using the local emission inventory, I have to generate emission files by myself instead of using SMOKE. I’ve successfully generate the emission files and they can be read by CMAQ. However I got very low O3 concentration and I doubted if my emissions are correct. In order to debug the issue, I want to turn off WARNING IN SUBROUTINE READ BCS Hi all, I have been trying to run CMAQ using four nested domains in Brazil, and the multi-day simulations have been displaying a Warning message on Read BC subroutine: >>—>> WARNING in subroutine Read BCs on PE 000 Applying fix to aerosol Boundary Conditions for aerosol modes. Turn on verbose_rdbcon preprocessor flag to learnmore. Even with the warnings, coarser domains (d01 and CCTM RUN-----------MCIP Dear All, When trying to run CCTM, I encounter following error, while I have not set some of the parameters anywhere. XCENT_B: 46.821998596191 XCENT3D (file): 51.387000000000 YCENT_B: 40.000000000000 YCENT3D (file): 35.725000000000 XCELL_B: 2000.000000000000 XCELL3D (file): 2000.000000000000 YCELL_B: 2000.000000000000 YCELL3D (file): 2000.000000000000 *** ERRORCOMBINE RUN ISSUE
Thanks for alerting us to the duplication of the BENZENE definition in SpecDef_saprc07tb_ae6_aq.txt. Commenting out or deleting one of the CCTM 5.3.2 PROGRAM RECEIVED SIGNAL SIGBUS: ACCESS TO AN Thanks, Liz. 1. I didn’t change the compilation option in config_cmaq.csh. "setenv myDBG “-Wall -O0 -g -fcheck=all -ffpe-trap=invalid,zero,overflow -fbacktrace”. ERROR IN RUN MCIP, NOT SAME DOMAIN what case this error? wrf files do not seem to be from same domain subroutine setup_wrfem - reading wrf header wrf grid dimensions (x,y,z) 85 76 33 *** subroutine: chkwpshdr *** wrf files do not seemto be
MCIP EXECUTION ERROR! First, I would double-check the date specified by your script variable “edate”, which is used to define the script variable “MCIP_END” to ensure that the end date is actually 18 UTC 31 Jan 2016. You can check the file “namelist.mcip” that is generated by the script to see how “MCIP_END” was set. RUNNING THE MCIP5.1 VERSION OF CMAQ5.3.1, THE LUFRAC_CRO *** subroutine: setup_wrfem *** did not find fractional land use in wrfout *** and did not find geogrid file *** – will not use fractional land use data MCIP ISSUE ABOUT FRC_URB2D I checked the variable “FRC_URB2D” and only find it in the geo_em.d0x.nc files rather than in the wrfout file. Thus, it looks like mcip is trying to extract this variable from wrfout files whereas this variable is not in it. PROBLE OF RUNNING CMAQ5.3 Please see this post on best practices for debugging and posting questions on the forum: PLEASE READ before posting QUESTIONS ABOUT SENSINPUT FILE Hi, I’m new to CAMQ-HDDM. Although I’ve already run it succesfully, I had some questions. Looking forward to your reply, thanks! EMIS term. I have some problems using “EMIS_1”,and fixed it with replacing EMIS_1 with TOTA. But i don’t know how to use more than 1 emision file, something like “EMIS_2”? AMOUNT term. If i want to cut 20% NOx in the region_1 using positive number TURNING OFF CHEMISTRY MECHANISM IN CMAQ Hi everyone. I’m using CMAQv5.3.1 to simulate Ozone concentration. As I’m using the local emission inventory, I have to generate emission files by myself instead of using SMOKE. I’ve successfully generate the emission files and they can be read by CMAQ. However I got very low O3 concentration and I doubted if my emissions are correct. In order to debug the issue, I want to turn off MPI_ABORT WAS INVOKED ON RANK 3 I run CMAQ 5.2.1 when March 16 2017 at 01:00:00 to March 31 2017 at 18:00:00. But it success until March 16 2017 at 17:00:00. It have maseage that: —>> WARNING in subroutine Read BCs on PE 000 Applying fix to aerosol Boundary Conditions for aerosol modes. Turn on verbose_rdbcon preprocessor flag to learnmore. M3WARN: DTBUF 20:52:30 March 16, 2017(2017075:205230) after IOAPI INSTALLTION UNABLE Hello Team, During the installation process in step three am curious to understand whether we need to create a directory named BIN na d the copy the files under the folder LIB.COMBINE RUN ISSUE
Thanks for alerting us to the duplication of the BENZENE definition in SpecDef_saprc07tb_ae6_aq.txt. Commenting out or deleting one of the HAVE PROBLEM WHEN RUN MCIP 5.0 WITH WRF 4.1 Dir Catalyst2682, This is my log file, but only the same information. Also, I send my csh file and make file when I compile MCIP (in CMAQ 5.3).Makefile.txt (4.7 KB) Look forward to the help of you and everyone using CMAQ. FOR USING SENSITIVITY BC FILE FOR NESTED RUNS Sergey, How do I need to setup if I have three nested domains (e.g. 36-km, 12-km, and 4-km)? I would like to get sensitivity BC files for second (12-km) and third domain (4-km) because I am studying how emission reductions of NOx and VOC in both coarse domains (36 and 12-km) influence surface ozone in the target domain (4-km). WARNING IN SUBROUTINE READ BCS Hi all, I have been trying to run CMAQ using four nested domains in Brazil, and the multi-day simulations have been displaying a Warning message on Read BC subroutine: >>—>> WARNING in subroutine Read BCs on PE 000 Applying fix to aerosol Boundary Conditions for aerosol modes. Turn on verbose_rdbcon preprocessor flag to learnmore. Even with the warnings, coarser domains (d01 and MCIP ISSUE ABOUT FRC_URB2D I checked the variable “FRC_URB2D” and only find it in the geo_em.d0x.nc files rather than in the wrfout file. Thus, it looks like mcip is trying to extract this variable from wrfout files whereas this variable is not in it. PROBLE OF RUNNING CMAQ5.3 Please see this post on best practices for debugging and posting questions on the forum: PLEASE READ before posting QUESTIONS ABOUT SENSINPUT FILE Hi, I’m new to CAMQ-HDDM. Although I’ve already run it succesfully, I had some questions. Looking forward to your reply, thanks! EMIS term. I have some problems using “EMIS_1”,and fixed it with replacing EMIS_1 with TOTA. But i don’t know how to use more than 1 emision file, something like “EMIS_2”? AMOUNT term. If i want to cut 20% NOx in the region_1 using positive number TURNING OFF CHEMISTRY MECHANISM IN CMAQ Hi everyone. I’m using CMAQv5.3.1 to simulate Ozone concentration. As I’m using the local emission inventory, I have to generate emission files by myself instead of using SMOKE. I’ve successfully generate the emission files and they can be read by CMAQ. However I got very low O3 concentration and I doubted if my emissions are correct. In order to debug the issue, I want to turn off MPI_ABORT WAS INVOKED ON RANK 3 I run CMAQ 5.2.1 when March 16 2017 at 01:00:00 to March 31 2017 at 18:00:00. But it success until March 16 2017 at 17:00:00. It have maseage that: —>> WARNING in subroutine Read BCs on PE 000 Applying fix to aerosol Boundary Conditions for aerosol modes. Turn on verbose_rdbcon preprocessor flag to learnmore. M3WARN: DTBUF 20:52:30 March 16, 2017(2017075:205230) after IOAPI INSTALLTION UNABLE Hello Team, During the installation process in step three am curious to understand whether we need to create a directory named BIN na d the copy the files under the folder LIB.COMBINE RUN ISSUE
Thanks for alerting us to the duplication of the BENZENE definition in SpecDef_saprc07tb_ae6_aq.txt. Commenting out or deleting one of the HAVE PROBLEM WHEN RUN MCIP 5.0 WITH WRF 4.1 Dir Catalyst2682, This is my log file, but only the same information. Also, I send my csh file and make file when I compile MCIP (in CMAQ 5.3).Makefile.txt (4.7 KB) Look forward to the help of you and everyone using CMAQ. FOR USING SENSITIVITY BC FILE FOR NESTED RUNS Sergey, How do I need to setup if I have three nested domains (e.g. 36-km, 12-km, and 4-km)? I would like to get sensitivity BC files for second (12-km) and third domain (4-km) because I am studying how emission reductions of NOx and VOC in both coarse domains (36 and 12-km) influence surface ozone in the target domain (4-km). WARNING IN SUBROUTINE READ BCS Hi all, I have been trying to run CMAQ using four nested domains in Brazil, and the multi-day simulations have been displaying a Warning message on Read BC subroutine: >>—>> WARNING in subroutine Read BCs on PE 000 Applying fix to aerosol Boundary Conditions for aerosol modes. Turn on verbose_rdbcon preprocessor flag to learnmore. Even with the warnings, coarser domains (d01 and NO DATA STARTING AT... IN M3TPROC I have an emissions file that has 25 time steps (2016001:080000 → 2016002:080000). I’m trying to generate a file with a daily total (24 hours). When I run M3TPROC I get the following errors. CMAQ 5.3.2 RELEASE (OCTOBER 2020) The U.S. EPA Office of Research and Development and the Community Modeling and Analysis System Center are pleased to announce the release of CMAQ version 5.3.2. TURNING OFF CHEMISTRY MECHANISM IN CMAQ Hi everyone. I’m using CMAQv5.3.1 to simulate Ozone concentration. As I’m using the local emission inventory, I have to generate emission files by myself instead of using SMOKE. I’ve successfully generate the emission files and they can be read by CMAQ. However I got very low O3 concentration and I doubted if my emissions are correct. In order to debug the issue, I want to turn off WARNING IN SUBROUTINE READ BCS Hi all, I have been trying to run CMAQ using four nested domains in Brazil, and the multi-day simulations have been displaying a Warning message on Read BC subroutine: >>—>> WARNING in subroutine Read BCs on PE 000 Applying fix to aerosol Boundary Conditions for aerosol modes. Turn on verbose_rdbcon preprocessor flag to learnmore. Even with the warnings, coarser domains (d01 and CCTM RUN-----------MCIP Dear All, When trying to run CCTM, I encounter following error, while I have not set some of the parameters anywhere. XCENT_B: 46.821998596191 XCENT3D (file): 51.387000000000 YCENT_B: 40.000000000000 YCENT3D (file): 35.725000000000 XCELL_B: 2000.000000000000 XCELL3D (file): 2000.000000000000 YCELL_B: 2000.000000000000 YCELL3D (file): 2000.000000000000 *** ERROR CCTM 5.3.2 PROGRAM RECEIVED SIGNAL SIGBUS: ACCESS TO AN Thanks, Liz. 1. I didn’t change the compilation option in config_cmaq.csh. "setenv myDBG “-Wall -O0 -g -fcheck=all -ffpe-trap=invalid,zero,overflow -fbacktrace”. RUNNING THE MCIP5.1 VERSION OF CMAQ5.3.1, THE LUFRAC_CRO *** subroutine: setup_wrfem *** did not find fractional land use in wrfout *** and did not find geogrid file *** – will not use fractional land use data ERROR IN RUN MCIP, NOT SAME DOMAIN what case this error? wrf files do not seem to be from same domain subroutine setup_wrfem - reading wrf header wrf grid dimensions (x,y,z) 85 76 33 *** subroutine: chkwpshdr *** wrf files do not seemto be
MCIP EXECUTION ERROR! First, I would double-check the date specified by your script variable “edate”, which is used to define the script variable “MCIP_END” to ensure that the end date is actually 18 UTC 31 Jan 2016. You can check the file “namelist.mcip” that is generated by the script to see how “MCIP_END” was set. ERROR IN RUNNING MCIP4.2 USING WRFV3.8 OUTPUTS Dear @wong.david-c, @tlspero, @lizadams, @bbaek, @Akhila, @hogrefe.christian, @cgnolte, @cjcoats I am having problems with MCIP. I used MCIP4.2 (the one that accompanied CMAQ5.0.2) to process WRF3.8 wrf files but got this error: *** SUBROUTINE: SETGRIDDEFS MCIP output interval cannot be shorter than input User-defined MCIP output interval = 60 Meteorology output interval = 61.0 *** MCIP ISSUE ABOUT FRC_URB2D I checked the variable “FRC_URB2D” and only find it in the geo_em.d0x.nc files rather than in the wrfout file. Thus, it looks like mcip is trying to extract this variable from wrfout files whereas this variable is not in it. PROBLE OF RUNNING CMAQ5.3 Please see this post on best practices for debugging and posting questions on the forum: PLEASE READ before posting QUESTIONS ABOUT SENSINPUT FILE Hi, I’m new to CAMQ-HDDM. Although I’ve already run it succesfully, I had some questions. Looking forward to your reply, thanks! EMIS term. I have some problems using “EMIS_1”,and fixed it with replacing EMIS_1 with TOTA. But i don’t know how to use more than 1 emision file, something like “EMIS_2”? AMOUNT term. If i want to cut 20% NOx in the region_1 using positive number TURNING OFF CHEMISTRY MECHANISM IN CMAQ Hi everyone. I’m using CMAQv5.3.1 to simulate Ozone concentration. As I’m using the local emission inventory, I have to generate emission files by myself instead of using SMOKE. I’ve successfully generate the emission files and they can be read by CMAQ. However I got very low O3 concentration and I doubted if my emissions are correct. In order to debug the issue, I want to turn off MPI_ABORT WAS INVOKED ON RANK 3 I run CMAQ 5.2.1 when March 16 2017 at 01:00:00 to March 31 2017 at 18:00:00. But it success until March 16 2017 at 17:00:00. It have maseage that: —>> WARNING in subroutine Read BCs on PE 000 Applying fix to aerosol Boundary Conditions for aerosol modes. Turn on verbose_rdbcon preprocessor flag to learnmore. M3WARN: DTBUF 20:52:30 March 16, 2017(2017075:205230) after IOAPI INSTALLTION UNABLE Hello Team, During the installation process in step three am curious to understand whether we need to create a directory named BIN na d the copy the files under the folder LIB.COMBINE RUN ISSUE
Thanks for alerting us to the duplication of the BENZENE definition in SpecDef_saprc07tb_ae6_aq.txt. Commenting out or deleting one of the HAVE PROBLEM WHEN RUN MCIP 5.0 WITH WRF 4.1 Dir Catalyst2682, This is my log file, but only the same information. Also, I send my csh file and make file when I compile MCIP (in CMAQ 5.3).Makefile.txt (4.7 KB) Look forward to the help of you and everyone using CMAQ. FOR USING SENSITIVITY BC FILE FOR NESTED RUNS Sergey, How do I need to setup if I have three nested domains (e.g. 36-km, 12-km, and 4-km)? I would like to get sensitivity BC files for second (12-km) and third domain (4-km) because I am studying how emission reductions of NOx and VOC in both coarse domains (36 and 12-km) influence surface ozone in the target domain (4-km). WARNING IN SUBROUTINE READ BCS Hi all, I have been trying to run CMAQ using four nested domains in Brazil, and the multi-day simulations have been displaying a Warning message on Read BC subroutine: >>—>> WARNING in subroutine Read BCs on PE 000 Applying fix to aerosol Boundary Conditions for aerosol modes. Turn on verbose_rdbcon preprocessor flag to learnmore. Even with the warnings, coarser domains (d01 and MCIP ISSUE ABOUT FRC_URB2D I checked the variable “FRC_URB2D” and only find it in the geo_em.d0x.nc files rather than in the wrfout file. Thus, it looks like mcip is trying to extract this variable from wrfout files whereas this variable is not in it. PROBLE OF RUNNING CMAQ5.3 Please see this post on best practices for debugging and posting questions on the forum: PLEASE READ before posting QUESTIONS ABOUT SENSINPUT FILE Hi, I’m new to CAMQ-HDDM. Although I’ve already run it succesfully, I had some questions. Looking forward to your reply, thanks! EMIS term. I have some problems using “EMIS_1”,and fixed it with replacing EMIS_1 with TOTA. But i don’t know how to use more than 1 emision file, something like “EMIS_2”? AMOUNT term. If i want to cut 20% NOx in the region_1 using positive number TURNING OFF CHEMISTRY MECHANISM IN CMAQ Hi everyone. I’m using CMAQv5.3.1 to simulate Ozone concentration. As I’m using the local emission inventory, I have to generate emission files by myself instead of using SMOKE. I’ve successfully generate the emission files and they can be read by CMAQ. However I got very low O3 concentration and I doubted if my emissions are correct. In order to debug the issue, I want to turn off MPI_ABORT WAS INVOKED ON RANK 3 I run CMAQ 5.2.1 when March 16 2017 at 01:00:00 to March 31 2017 at 18:00:00. But it success until March 16 2017 at 17:00:00. It have maseage that: —>> WARNING in subroutine Read BCs on PE 000 Applying fix to aerosol Boundary Conditions for aerosol modes. Turn on verbose_rdbcon preprocessor flag to learnmore. M3WARN: DTBUF 20:52:30 March 16, 2017(2017075:205230) after IOAPI INSTALLTION UNABLE Hello Team, During the installation process in step three am curious to understand whether we need to create a directory named BIN na d the copy the files under the folder LIB.COMBINE RUN ISSUE
Thanks for alerting us to the duplication of the BENZENE definition in SpecDef_saprc07tb_ae6_aq.txt. Commenting out or deleting one of the HAVE PROBLEM WHEN RUN MCIP 5.0 WITH WRF 4.1 Dir Catalyst2682, This is my log file, but only the same information. Also, I send my csh file and make file when I compile MCIP (in CMAQ 5.3).Makefile.txt (4.7 KB) Look forward to the help of you and everyone using CMAQ. FOR USING SENSITIVITY BC FILE FOR NESTED RUNS Sergey, How do I need to setup if I have three nested domains (e.g. 36-km, 12-km, and 4-km)? I would like to get sensitivity BC files for second (12-km) and third domain (4-km) because I am studying how emission reductions of NOx and VOC in both coarse domains (36 and 12-km) influence surface ozone in the target domain (4-km). WARNING IN SUBROUTINE READ BCS Hi all, I have been trying to run CMAQ using four nested domains in Brazil, and the multi-day simulations have been displaying a Warning message on Read BC subroutine: >>—>> WARNING in subroutine Read BCs on PE 000 Applying fix to aerosol Boundary Conditions for aerosol modes. Turn on verbose_rdbcon preprocessor flag to learnmore. Even with the warnings, coarser domains (d01 and NO DATA STARTING AT... IN M3TPROC I have an emissions file that has 25 time steps (2016001:080000 → 2016002:080000). I’m trying to generate a file with a daily total (24 hours). When I run M3TPROC I get the following errors. CMAQ 5.3.2 RELEASE (OCTOBER 2020) The U.S. EPA Office of Research and Development and the Community Modeling and Analysis System Center are pleased to announce the release of CMAQ version 5.3.2. TURNING OFF CHEMISTRY MECHANISM IN CMAQ Hi everyone. I’m using CMAQv5.3.1 to simulate Ozone concentration. As I’m using the local emission inventory, I have to generate emission files by myself instead of using SMOKE. I’ve successfully generate the emission files and they can be read by CMAQ. However I got very low O3 concentration and I doubted if my emissions are correct. In order to debug the issue, I want to turn off WARNING IN SUBROUTINE READ BCS Hi all, I have been trying to run CMAQ using four nested domains in Brazil, and the multi-day simulations have been displaying a Warning message on Read BC subroutine: >>—>> WARNING in subroutine Read BCs on PE 000 Applying fix to aerosol Boundary Conditions for aerosol modes. Turn on verbose_rdbcon preprocessor flag to learnmore. Even with the warnings, coarser domains (d01 and CCTM RUN-----------MCIP Dear All, When trying to run CCTM, I encounter following error, while I have not set some of the parameters anywhere. XCENT_B: 46.821998596191 XCENT3D (file): 51.387000000000 YCENT_B: 40.000000000000 YCENT3D (file): 35.725000000000 XCELL_B: 2000.000000000000 XCELL3D (file): 2000.000000000000 YCELL_B: 2000.000000000000 YCELL3D (file): 2000.000000000000 *** ERROR CCTM 5.3.2 PROGRAM RECEIVED SIGNAL SIGBUS: ACCESS TO AN Thanks, Liz. 1. I didn’t change the compilation option in config_cmaq.csh. "setenv myDBG “-Wall -O0 -g -fcheck=all -ffpe-trap=invalid,zero,overflow -fbacktrace”. RUNNING THE MCIP5.1 VERSION OF CMAQ5.3.1, THE LUFRAC_CRO *** subroutine: setup_wrfem *** did not find fractional land use in wrfout *** and did not find geogrid file *** – will not use fractional land use data ERROR IN RUN MCIP, NOT SAME DOMAIN what case this error? wrf files do not seem to be from same domain subroutine setup_wrfem - reading wrf header wrf grid dimensions (x,y,z) 85 76 33 *** subroutine: chkwpshdr *** wrf files do not seemto be
MCIP EXECUTION ERROR! First, I would double-check the date specified by your script variable “edate”, which is used to define the script variable “MCIP_END” to ensure that the end date is actually 18 UTC 31 Jan 2016. You can check the file “namelist.mcip” that is generated by the script to see how “MCIP_END” was set. ERROR IN RUNNING MCIP4.2 USING WRFV3.8 OUTPUTS Dear @wong.david-c, @tlspero, @lizadams, @bbaek, @Akhila, @hogrefe.christian, @cgnolte, @cjcoats I am having problems with MCIP. I used MCIP4.2 (the one that accompanied CMAQ5.0.2) to process WRF3.8 wrf files but got this error: *** SUBROUTINE: SETGRIDDEFS MCIP output interval cannot be shorter than input User-defined MCIP output interval = 60 Meteorology output interval = 61.0 *** MCIP ISSUE ABOUT FRC_URB2D I checked the variable “FRC_URB2D” and only find it in the geo_em.d0x.nc files rather than in the wrfout file. Thus, it looks like mcip is trying to extract this variable from wrfout files whereas this variable is not in it. PROBLE OF RUNNING CMAQ5.3 Please see this post on best practices for debugging and posting questions on the forum: PLEASE READ before posting QUESTIONS ABOUT SENSINPUT FILE Hi, I’m new to CAMQ-HDDM. Although I’ve already run it succesfully, I had some questions. Looking forward to your reply, thanks! EMIS term. I have some problems using “EMIS_1”,and fixed it with replacing EMIS_1 with TOTA. But i don’t know how to use more than 1 emision file, something like “EMIS_2”? AMOUNT term. If i want to cut 20% NOx in the region_1 using positive number CMAQV5.2.1 COMPILING ISSUE Hi all, I’m a sysadmin who helped Yukui finally get CAMQ compiled on our cluster. I just wanted to report some of the experiences we’ve had with the installation and build process in the hopes that some of the shortcomings might be considered and addressed.COMBINE RUN ISSUE
Thanks for alerting us to the duplication of the BENZENE definition in SpecDef_saprc07tb_ae6_aq.txt. Commenting out or deleting one of the IOAPI INSTALLTION UNABLE Hello Team, During the installation process in step three am curious to understand whether we need to create a directory named BIN na d the copy the files under the folder LIB. HAVE PROBLEM WHEN RUN MCIP 5.0 WITH WRF 4.1 Dir Catalyst2682, This is my log file, but only the same information. Also, I send my csh file and make file when I compile MCIP (in CMAQ 5.3).Makefile.txt (4.7 KB) Look forward to the help of you and everyone using CMAQ. FOR USING SENSITIVITY BC FILE FOR NESTED RUNS Sergey, How do I need to setup if I have three nested domains (e.g. 36-km, 12-km, and 4-km)? I would like to get sensitivity BC files for second (12-km) and third domain (4-km) because I am studying how emission reductions of NOx and VOC in both coarse domains (36 and 12-km) influence surface ozone in the target domain (4-km). CCTM DOESN'T WRITE CGRID FILE I am trying to run CMAQv5.2.1 and was able to successfully run the benchmark case. But now in trying to run my own simulation, the CCTM is not writing all of the necessary output files before it moves on tothe next day
INSTALLING NETCDF CLASSIC FOR CMAQ ISN'T WORKING The netCDF C library configure command uses the disable-netcdf-4 -disable-dap. The netcdf Fortran configure command does not use this command. Please follow the instructions carefully and begin using the csh or ksh shell as your default shell. MCIP ISSUE ABOUT FRC_URB2D I checked the variable “FRC_URB2D” and only find it in the geo_em.d0x.nc files rather than in the wrfout file. Thus, it looks like mcip is trying to extract this variable from wrfout files whereas this variable is not in it. PROBLE OF RUNNING CMAQ5.3 Please see this post on best practices for debugging and posting questions on the forum: PLEASE READ before posting QUESTIONS ABOUT SENSINPUT FILE Hi, I’m new to CAMQ-HDDM. Although I’ve already run it succesfully, I had some questions. Looking forward to your reply, thanks! EMIS term. I have some problems using “EMIS_1”,and fixed it with replacing EMIS_1 with TOTA. But i don’t know how to use more than 1 emision file, something like “EMIS_2”? AMOUNT term. If i want to cut 20% NOx in the region_1 using positive number CMAQV5.2.1 COMPILING ISSUE Hi all, I’m a sysadmin who helped Yukui finally get CAMQ compiled on our cluster. I just wanted to report some of the experiences we’ve had with the installation and build process in the hopes that some of the shortcomings might be considered and addressed.COMBINE RUN ISSUE
Thanks for alerting us to the duplication of the BENZENE definition in SpecDef_saprc07tb_ae6_aq.txt. Commenting out or deleting one of the IOAPI INSTALLTION UNABLE Hello Team, During the installation process in step three am curious to understand whether we need to create a directory named BIN na d the copy the files under the folder LIB. HAVE PROBLEM WHEN RUN MCIP 5.0 WITH WRF 4.1 Dir Catalyst2682, This is my log file, but only the same information. Also, I send my csh file and make file when I compile MCIP (in CMAQ 5.3).Makefile.txt (4.7 KB) Look forward to the help of you and everyone using CMAQ. FOR USING SENSITIVITY BC FILE FOR NESTED RUNS Sergey, How do I need to setup if I have three nested domains (e.g. 36-km, 12-km, and 4-km)? I would like to get sensitivity BC files for second (12-km) and third domain (4-km) because I am studying how emission reductions of NOx and VOC in both coarse domains (36 and 12-km) influence surface ozone in the target domain (4-km). CCTM DOESN'T WRITE CGRID FILE I am trying to run CMAQv5.2.1 and was able to successfully run the benchmark case. But now in trying to run my own simulation, the CCTM is not writing all of the necessary output files before it moves on tothe next day
INSTALLING NETCDF CLASSIC FOR CMAQ ISN'T WORKING The netCDF C library configure command uses the disable-netcdf-4 -disable-dap. The netcdf Fortran configure command does not use this command. Please follow the instructions carefully and begin using the csh or ksh shell as your default shell. MCIP ISSUE ABOUT FRC_URB2D I checked the variable “FRC_URB2D” and only find it in the geo_em.d0x.nc files rather than in the wrfout file. Thus, it looks like mcip is trying to extract this variable from wrfout files whereas this variable is not in it. PROBLE OF RUNNING CMAQ5.3 Please see this post on best practices for debugging and posting questions on the forum: PLEASE READ before posting CONSULTATION ON THE WRF-CMAQ TWO WAY Hi I intend to study the interaction between ozone and aerosols with model . As we all know , aerosols have indirect and direct feedback to radiation, and aerosols’feedback to radiation also can affect ozone formation. The official website of EPA shows that the indirect effects of the WRF-CMAQ two way Coupled Model are under development. Meanwhile, the references on the application of thisCCTM COMPILATION
Maria. lizadams April 2, 2019, 7:16pm #2. Hi Maria, It may be something as simple of adding -lmpi to your config_cmaq.csh. config_cmaq.csh: setenv mpi_lib “-lmpi”. If this doesn’t work, please send the following information: If you are using modules on a compute server, please use the module list command to see whatcompiler is loaded:
TURNING OFF CHEMISTRY MECHANISM IN CMAQ Hi everyone. I’m using CMAQv5.3.1 to simulate Ozone concentration. As I’m using the local emission inventory, I have to generate emission files by myself instead of using SMOKE. I’ve successfully generate the emission files and they can be read by CMAQ. However I got very low O3 concentration and I doubted if my emissions are correct. In order to debug the issue, I want to turn off INSTALLING NETCDF CLASSIC FOR CMAQ ISN'T WORKING The netCDF C library configure command uses the disable-netcdf-4 -disable-dap. The netcdf Fortran configure command does not use this command. Please follow the instructions carefully and begin using the csh or ksh shell as your default shell. MCIP COMPILE MCOUTCOM_MOD.O I am building CMAQv5.2.1 and cannot compile MCIP. The issue is related to one of the .f90 files, so I’m not sure how to address it. Thankyou for any
HOW DO I COMPUTE PM2.5, PM10 OR PM1 FROM CMAQ OUTPUT For example, to find how to calculate PM2.5 using the CB05e51_ae6 mechanism, open the file “SpecDef_cb05e51_ae6_aq.txt” and read the documentation on PM2.5 calculations. The species definition file will indicate which species should be included in PM2.5 (for example: sulfate, ammonium, and organic carbon) as well as factors to obtainthe
ERROR WHILE RUNNING THE NEW MCIP5.0 @Catalyst2682 –. Have you updated your MCIP script to use the version that was released with MCIPv5.0? If not, please do that. There are several elements in the namelist, “filenames”, that were changed between MCIPv4.5 and MCIPv5.0. WARNING IN SUBROUTINE READ BCS Hi all, I have been trying to run CMAQ using four nested domains in Brazil, and the multi-day simulations have been displaying a Warning message on Read BC subroutine: >>—>> WARNING in subroutine Read BCs on PE 000 Applying fix to aerosol Boundary Conditions for aerosol modes. Turn on verbose_rdbcon preprocessor flag to learnmore. Even with the warnings, coarser domains (d01 and MCIP ISSUE ABOUT FRC_URB2D I checked the variable “FRC_URB2D” and only find it in the geo_em.d0x.nc files rather than in the wrfout file. Thus, it looks like mcip is trying to extract this variable from wrfout files whereas this variable is not in it. PROBLE OF RUNNING CMAQ5.3 Please see this post on best practices for debugging and posting questions on the forum: PLEASE READ before posting QUESTIONS ABOUT SENSINPUT FILE Hi, I’m new to CAMQ-HDDM. Although I’ve already run it succesfully, I had some questions. Looking forward to your reply, thanks! EMIS term. I have some problems using “EMIS_1”,and fixed it with replacing EMIS_1 with TOTA. But i don’t know how to use more than 1 emision file, something like “EMIS_2”? AMOUNT term. If i want to cut 20% NOx in the region_1 using positive number CMAQV5.2.1 COMPILING ISSUE Hi all, I’m a sysadmin who helped Yukui finally get CAMQ compiled on our cluster. I just wanted to report some of the experiences we’ve had with the installation and build process in the hopes that some of the shortcomings might be considered and addressed.COMBINE RUN ISSUE
Thanks for alerting us to the duplication of the BENZENE definition in SpecDef_saprc07tb_ae6_aq.txt. Commenting out or deleting one of the IOAPI INSTALLTION UNABLE Hello Team, During the installation process in step three am curious to understand whether we need to create a directory named BIN na d the copy the files under the folder LIB. HAVE PROBLEM WHEN RUN MCIP 5.0 WITH WRF 4.1 Dir Catalyst2682, This is my log file, but only the same information. Also, I send my csh file and make file when I compile MCIP (in CMAQ 5.3).Makefile.txt (4.7 KB) Look forward to the help of you and everyone using CMAQ. FOR USING SENSITIVITY BC FILE FOR NESTED RUNS Sergey, How do I need to setup if I have three nested domains (e.g. 36-km, 12-km, and 4-km)? I would like to get sensitivity BC files for second (12-km) and third domain (4-km) because I am studying how emission reductions of NOx and VOC in both coarse domains (36 and 12-km) influence surface ozone in the target domain (4-km). CCTM DOESN'T WRITE CGRID FILE I am trying to run CMAQv5.2.1 and was able to successfully run the benchmark case. But now in trying to run my own simulation, the CCTM is not writing all of the necessary output files before it moves on tothe next day
INSTALLING NETCDF CLASSIC FOR CMAQ ISN'T WORKING The netCDF C library configure command uses the disable-netcdf-4 -disable-dap. The netcdf Fortran configure command does not use this command. Please follow the instructions carefully and begin using the csh or ksh shell as your default shell. MCIP ISSUE ABOUT FRC_URB2D I checked the variable “FRC_URB2D” and only find it in the geo_em.d0x.nc files rather than in the wrfout file. Thus, it looks like mcip is trying to extract this variable from wrfout files whereas this variable is not in it. PROBLE OF RUNNING CMAQ5.3 Please see this post on best practices for debugging and posting questions on the forum: PLEASE READ before posting QUESTIONS ABOUT SENSINPUT FILE Hi, I’m new to CAMQ-HDDM. Although I’ve already run it succesfully, I had some questions. Looking forward to your reply, thanks! EMIS term. I have some problems using “EMIS_1”,and fixed it with replacing EMIS_1 with TOTA. But i don’t know how to use more than 1 emision file, something like “EMIS_2”? AMOUNT term. If i want to cut 20% NOx in the region_1 using positive number CMAQV5.2.1 COMPILING ISSUE Hi all, I’m a sysadmin who helped Yukui finally get CAMQ compiled on our cluster. I just wanted to report some of the experiences we’ve had with the installation and build process in the hopes that some of the shortcomings might be considered and addressed.COMBINE RUN ISSUE
Thanks for alerting us to the duplication of the BENZENE definition in SpecDef_saprc07tb_ae6_aq.txt. Commenting out or deleting one of the IOAPI INSTALLTION UNABLE Hello Team, During the installation process in step three am curious to understand whether we need to create a directory named BIN na d the copy the files under the folder LIB. HAVE PROBLEM WHEN RUN MCIP 5.0 WITH WRF 4.1 Dir Catalyst2682, This is my log file, but only the same information. Also, I send my csh file and make file when I compile MCIP (in CMAQ 5.3).Makefile.txt (4.7 KB) Look forward to the help of you and everyone using CMAQ. FOR USING SENSITIVITY BC FILE FOR NESTED RUNS Sergey, How do I need to setup if I have three nested domains (e.g. 36-km, 12-km, and 4-km)? I would like to get sensitivity BC files for second (12-km) and third domain (4-km) because I am studying how emission reductions of NOx and VOC in both coarse domains (36 and 12-km) influence surface ozone in the target domain (4-km). CCTM DOESN'T WRITE CGRID FILE I am trying to run CMAQv5.2.1 and was able to successfully run the benchmark case. But now in trying to run my own simulation, the CCTM is not writing all of the necessary output files before it moves on tothe next day
INSTALLING NETCDF CLASSIC FOR CMAQ ISN'T WORKING The netCDF C library configure command uses the disable-netcdf-4 -disable-dap. The netcdf Fortran configure command does not use this command. Please follow the instructions carefully and begin using the csh or ksh shell as your default shell. MCIP ISSUE ABOUT FRC_URB2D I checked the variable “FRC_URB2D” and only find it in the geo_em.d0x.nc files rather than in the wrfout file. Thus, it looks like mcip is trying to extract this variable from wrfout files whereas this variable is not in it. PROBLE OF RUNNING CMAQ5.3 Please see this post on best practices for debugging and posting questions on the forum: PLEASE READ before posting CONSULTATION ON THE WRF-CMAQ TWO WAY Hi I intend to study the interaction between ozone and aerosols with model . As we all know , aerosols have indirect and direct feedback to radiation, and aerosols’feedback to radiation also can affect ozone formation. The official website of EPA shows that the indirect effects of the WRF-CMAQ two way Coupled Model are under development. Meanwhile, the references on the application of thisCCTM COMPILATION
Maria. lizadams April 2, 2019, 7:16pm #2. Hi Maria, It may be something as simple of adding -lmpi to your config_cmaq.csh. config_cmaq.csh: setenv mpi_lib “-lmpi”. If this doesn’t work, please send the following information: If you are using modules on a compute server, please use the module list command to see whatcompiler is loaded:
TURNING OFF CHEMISTRY MECHANISM IN CMAQ Hi everyone. I’m using CMAQv5.3.1 to simulate Ozone concentration. As I’m using the local emission inventory, I have to generate emission files by myself instead of using SMOKE. I’ve successfully generate the emission files and they can be read by CMAQ. However I got very low O3 concentration and I doubted if my emissions are correct. In order to debug the issue, I want to turn off INSTALLING NETCDF CLASSIC FOR CMAQ ISN'T WORKING The netCDF C library configure command uses the disable-netcdf-4 -disable-dap. The netcdf Fortran configure command does not use this command. Please follow the instructions carefully and begin using the csh or ksh shell as your default shell. MCIP COMPILE MCOUTCOM_MOD.O I am building CMAQv5.2.1 and cannot compile MCIP. The issue is related to one of the .f90 files, so I’m not sure how to address it. Thankyou for any
HOW DO I COMPUTE PM2.5, PM10 OR PM1 FROM CMAQ OUTPUT For example, to find how to calculate PM2.5 using the CB05e51_ae6 mechanism, open the file “SpecDef_cb05e51_ae6_aq.txt” and read the documentation on PM2.5 calculations. The species definition file will indicate which species should be included in PM2.5 (for example: sulfate, ammonium, and organic carbon) as well as factors to obtainthe
ERROR WHILE RUNNING THE NEW MCIP5.0 @Catalyst2682 –. Have you updated your MCIP script to use the version that was released with MCIPv5.0? If not, please do that. There are several elements in the namelist, “filenames”, that were changed between MCIPv4.5 and MCIPv5.0. WARNING IN SUBROUTINE READ BCS Hi all, I have been trying to run CMAQ using four nested domains in Brazil, and the multi-day simulations have been displaying a Warning message on Read BC subroutine: >>—>> WARNING in subroutine Read BCs on PE 000 Applying fix to aerosol Boundary Conditions for aerosol modes. Turn on verbose_rdbcon preprocessor flag to learnmore. Even with the warnings, coarser domains (d01 andSign UpLog In
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How can I get PM25_TOT through CMAQv5.3-ISAM resultCMAQ-ISAM
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Kelvin
Dec '19
Hi, friends of the Forum. I have used CMAQv5.3-ISAM to get the source apportionment results of various components, but when I try to calculate source apportionment results of PM2.5(PM25_TOT in the model i think), I found that I am missing “ASOMI” in “ATOTI”,"ASOMJ in “ATOTJ”, and every components of “ATOTK”. So does that mean I can’t do source appoinment to PM2.5 through CMAQv5.3-ISAM, or the results is acceptable even less of these components? Looking forward to your reply . ps.ASOMI=ALVOO1+ALVOO2I+ASVOO1I+ASVOO2I, ASOMJ=AISO1J+AISO2J+ AISO3J+AMT1J+AMT2J+AMT3J+AMT4J+AMT5J+AMT6J+AMTNO3J+AMTHYDJ+AGLYJ+ASQTJ+AORGCJ+AOLGBJ+AOLGAJ+ALVOO1J+ALVOO2J+ASVOO1J+ASVOO2J+ASVOO3J+APCSOJ+AAVB1J+AAVB2J+AAVB3J+AAVB4J Solved by sergey in post #2 > Hi Kelvin, Sorry for the late reply. Unfortunately, total PM2.5 is > currently unavailable for ISAM as of version 5.3.1. This is > something we are currently testing for the next release of ISAM.> Sergey
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sergey
Jan '20
Hi Kelvin,
Sorry for the late reply. Unfortunately, total PM2.5 is currently unavailable for ISAM as of version 5.3.1. This is something we are currently testing for the next release of ISAM.Sergey
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