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> Integrating and representing genome, metagenome, taxonomy resources > and the analysis datasets with Semantic Web Technologies.Learn more >>
FEATURES
DATA SOURCES OF MICROBEDB.JP VER. 3 Metagenome and Microbes Environmental Ontology 2401Taxonomy 129342
Ortholog Groups 4203173 Microbial Phenotype Ontology 277Genome and
Metagenome Sample 1920339 Culture collections in Japan 38414 Pathogenic Disease Ontology 387Human Microbiome
Associated Disease Ontology 305KEGG Orthology
22421 Last Modified date:2020-02-16
KEYWORD SEARCH
MicrobeDB.jp provides a keyword search function with a simple interface. The keyword search gives the user free-text access to the literal fields of all RDF/OWL resources on MicrobeDB.jp. Click Textsearch .
REPRESENTATION AND VISUALIZATION For representation of database resources and analysis results, MicrobeDB.jp project has developed 197 TogoStanza, whch is a generic Web framework which enables the visualizing of reusable Web components that are embeddable into any Web applications. See TogoStanza List for more information. COMPARATIVE ANALYSIS MicrobeDB.jp provides Comparative Analysis Tools between the metagenome samples , the environment terms , the taxa , and sample metadata and taxonomic/functional analysis based on TogoStanza framework. If you are interested in comparative analysis, it can be visualized by using a comparison tool.UPLOAD YOUR DATA
By uploading the data to MicrobeDB.jp, you can execute comparative analysis between your data and genomic and metagenomic analysis results on MicrobeDB.jp. For that, you need to CREATE your accountand Sign in
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